Isothermal titration calorimetry

























Isothermal Titration Calorimetry
Acronym ITC
Classification Thermal analysis
Manufacturers
TA Instruments, Microcal/Malvern Instruments
Other techniques
Related
Isothermal microcalorimetry
Differential scanning calorimetry

Isothermal titration calorimetry (ITC) is a physical technique used to determine the thermodynamic parameters of interactions in solution. It is most often used to study the binding of small molecules (such as medicinal compounds) to larger macromolecules (proteins, DNA etc.).[1]
It consists of two cells which are enclosed in an adiabatic jacket. The compounds to be studied are placed in the sample cell, while the other cell, the reference cell, is used as a control and contains the buffer in which the sample is dissolved.




Contents






  • 1 Thermodynamic measurements


  • 2 The instrument


  • 3 Application in drug discovery


  • 4 See also


  • 5 References


  • 6 External links





Thermodynamic measurements


ITC is a quantitative technique that can determine the binding affinity (Ka{displaystyle K_{a}}K_{a}), enthalpy changes (ΔH{displaystyle Delta H}Delta H), and binding stoichiometry (n{displaystyle n}n) of the interaction between two or more molecules in solution. From these initial measurements, Gibbs free energy changes (ΔG{displaystyle Delta G}Delta G) and entropy changes (ΔS{displaystyle Delta S}Delta S) can be determined using the relationship:


ΔG=−RTln⁡Ka=ΔH−S{displaystyle Delta G=-RTln {K_{a}}=Delta H-TDelta S}{displaystyle Delta G=-RTln {K_{a}}=Delta H-TDelta S}

(where R{displaystyle R}R is the gas constant and T{displaystyle T}T is the absolute temperature).



The instrument




Schematic of an ITC instrument


An isothermal titration calorimeter is composed of two identical cells made of a highly efficient thermally conducting and chemically inert material such as Hastelloy alloy or gold, surrounded by an adiabatic jacket.[2] Sensitive thermopile/thermocouple circuits are used to detect temperature differences between the reference cell (filled with buffer or water) and the sample cell containing the macromolecule. Prior to addition of ligand, a constant power (<1 mW) is applied to the reference cell. This directs a feedback circuit, activating a heater located on the sample cell.[3] During the experiment, ligand is titrated into the sample cell in precisely known aliquots, causing heat to be either taken up or evolved (depending on the nature of the reaction). Measurements consist of the time-dependent input of power required to maintain equal temperatures between the sample and reference cells.


In an exothermic reaction, the temperature in the sample cell increases upon addition of ligand. This causes the feedback power to the sample cell to be decreased (remember: a reference power is applied to the reference cell) in order to maintain an equal temperature between the two cells. In an endothermic reaction, the opposite occurs; the feedback circuit increases the power in order to maintain a constant temperature (isothermic/isothermal operation).


Observations are plotted as the power needed to maintain the reference and the sample cell at an identical temperature against time. As a result, the experimental raw data consists of a series of spikes of heat flow (power), with every spike corresponding to one ligand injection. These heat flow spikes/pulses are integrated with respect to time, giving the total heat exchanged per injection. The pattern of these heat effects as a function of the molar ratio [ligand]/[macromolecule] can then be analysed to give the thermodynamic parameters of the interaction under study. Degassing samples is often necessary in order to obtain good measurements as the presence of gas bubbles within the sample cell will lead to abnormal data plots in the recorded results. The entire experiment takes place under computer control.



Application in drug discovery


ITC is one of the latest techniques to be used in characterizing binding affinity of ligands for proteins. It is typically used as a secondary screening technique in high throughput screening. ITC is particularly useful as it gives not only the binding affinity, but also the thermodynamics of the binding. This thermodynamic characterization allows for further optimization of compounds.[4]



See also



  • Differential scanning calorimetry

  • Dual polarisation interferometry

  • Isothermal microcalorimetry

  • Surface plasmon resonance



References




  1. ^ Pierce, Michael M.; Raman, C.S.; Nall, Barry T. (1999). "Isothermal Titration Calorimetry of Protein–Protein Interactions". Methods. 19 (2): 213–221. doi:10.1006/meth.1999.0852. PMID 10527727..mw-parser-output cite.citation{font-style:inherit}.mw-parser-output .citation q{quotes:"""""""'""'"}.mw-parser-output .citation .cs1-lock-free a{background:url("//upload.wikimedia.org/wikipedia/commons/thumb/6/65/Lock-green.svg/9px-Lock-green.svg.png")no-repeat;background-position:right .1em center}.mw-parser-output .citation .cs1-lock-limited a,.mw-parser-output .citation .cs1-lock-registration a{background:url("//upload.wikimedia.org/wikipedia/commons/thumb/d/d6/Lock-gray-alt-2.svg/9px-Lock-gray-alt-2.svg.png")no-repeat;background-position:right .1em center}.mw-parser-output .citation .cs1-lock-subscription a{background:url("//upload.wikimedia.org/wikipedia/commons/thumb/a/aa/Lock-red-alt-2.svg/9px-Lock-red-alt-2.svg.png")no-repeat;background-position:right .1em center}.mw-parser-output .cs1-subscription,.mw-parser-output .cs1-registration{color:#555}.mw-parser-output .cs1-subscription span,.mw-parser-output .cs1-registration span{border-bottom:1px dotted;cursor:help}.mw-parser-output .cs1-ws-icon a{background:url("//upload.wikimedia.org/wikipedia/commons/thumb/4/4c/Wikisource-logo.svg/12px-Wikisource-logo.svg.png")no-repeat;background-position:right .1em center}.mw-parser-output code.cs1-code{color:inherit;background:inherit;border:inherit;padding:inherit}.mw-parser-output .cs1-hidden-error{display:none;font-size:100%}.mw-parser-output .cs1-visible-error{font-size:100%}.mw-parser-output .cs1-maint{display:none;color:#33aa33;margin-left:0.3em}.mw-parser-output .cs1-subscription,.mw-parser-output .cs1-registration,.mw-parser-output .cs1-format{font-size:95%}.mw-parser-output .cs1-kern-left,.mw-parser-output .cs1-kern-wl-left{padding-left:0.2em}.mw-parser-output .cs1-kern-right,.mw-parser-output .cs1-kern-wl-right{padding-right:0.2em}


  2. ^ O’Brien, R., Ladbury, J.E. and Chowdry B.Z. (2000) Isothermal titration calorimetry of biomolecules. Chapter 10 in Protein-Ligand interactions: hydrodynamics and calorimetry Ed. Harding, S.E. and Chowdry, B.Z, Oxford University Press.
    ISBN 0-19-963746-6



  3. ^ VP-ITC Instruction Manual (2001). Microcal Inc., Northampton, MA. http://www.microcalorimetry.com


  4. ^ Desphande, T.Isothermal Titration Calorimetry (ITC): Application in Drug Discovery



External links




  • AFFINImeter is a software for the analysis of ITC measurements. It includes a free model builder tool that allows designing an unlimited variety of Sequential Binding (competitive) model involving up to three different compounds.

  • Alternative ITC data analysis software: IC ITC

  • Scripted Utility for Isothermal Titration Calorimetry Analysis & Stoichiometric Examination: suITCase

  • Microcal/Malvern Instruments




這個網誌中的熱門文章

Xamarin.form Move up view when keyboard appear

Post-Redirect-Get with Spring WebFlux and Thymeleaf

Anylogic : not able to use stopDelay()