“make all -j”$(nproc)" command works within Docker container but not in Dockerfile





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1















I wrote the following Dockerfile to build an image with OpenPose (https://github.com/CMU-Perceptual-Computing-Lab/openpose)



# Download base image
FROM nvidia/cuda:9.0-cudnn7-devel

# Set keyboard configuration in advance of installing CUDA
#RUN apt-get update && apt-get install -yq keyboard-configuration

#==========Caffe dependencies=================
RUN apt-get --assume-yes update &&
apt-get --assume-yes install build-essential
libatlas-base-dev
libprotobuf-dev
libleveldb-dev
libsnappy-dev
libhdf5-serial-dev
protobuf-compiler

RUN apt-get --assume-yes install --no-install-recommends libboost-all-dev

# Remaining dependencies
RUN apt-get --assume-yes install libgflags-dev
libgoogle-glog-dev
liblmdb-dev

#=========OpenCV============
RUN apt-get update && apt-get --assume-yes install libopencv-dev
python-opencv
python-pip
python-dev
cmake
libeigen3-dev
doxygen

#=========Python Libs=======
RUN pip install --upgrade numpy
protobuf
opencv-python

#=========OpenPose==========
RUN apt-get -y install git
RUN git clone --depth 10 https://github.com/CMU-Perceptual-Computing-Lab/openpose.git /opt/openpose
RUN apt-get install -y cmake

# Set environment variables
ENV PATH "/usr/local/cuda-9.0/bin:$PATH"
ENV LD_LIBRARY_PATH "/usr/local/cuda-9.0/lib64:$LD_LIBRARY_PATH"
ENV OPENPOSE_ROOT /opt/openpose

RUN cd /opt/openpose &&
mkdir -p build && cd build &&
cmake
-DCMAKE_BUILD_TYPE="Release"
-DBUILD_EXAMPLES=ON
-DBUILD_DOCS=ON
-DBUILD_SHARED_LIBS=ON
-DDOWNLOAD_BODY_25_MODEL=ON
-DDOWNLOAD_BODY_COCO_MODEL=ON
-DDOWNLOAD_BODY_MPI_MODEL=ON
-DDOWNLOAD_HAND_MODEL=ON
-DWITH_3D_RENDERER:BOOL=OFF
-DBUILD_PYTHON=ON ../

RUN printenv && cd opt/openpose/build && make all -n -j"$(nproc)"


When building the Dockerfile with nvidia-docker build -t openpose_image . I get the following error in the last step:



Step 14/14 : RUN printenv && cd opt/openpose/build && make all -n -j"$(nproc)"
---> Running in 8cbc7a731e6d
LIBRARY_PATH=/usr/local/cuda/lib64/stubs
HOSTNAME=8cbc7a731e6d
LD_LIBRARY_PATH=/usr/local/cuda-9.0/lib64:/usr/local/nvidia/lib:/usr/local/nvidia/lib64
HOME=/root
CUDA_VERSION=9.0.176
NVIDIA_REQUIRE_CUDA=cuda>=9.0
NVIDIA_DRIVER_CAPABILITIES=compute,utility
PATH=/usr/local/cuda-9.0/bin:/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
CUDA_PKG_VERSION=9-0=9.0.176-1
CUDNN_VERSION=7.4.1.5
PWD=/
NVIDIA_VISIBLE_DEVICES=all
NCCL_VERSION=2.3.7
OPENPOSE_ROOT=/opt/openpose
/usr/bin/cmake -H/opt/openpose -B/opt/openpose/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /opt/openpose/build/CMakeFiles /opt/openpose/build/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make -f CMakeFiles/doc_doxygen.dir/build.make CMakeFiles/doc_doxygen.dir/depend
make -f CMakeFiles/openpose_caffe.dir/build.make CMakeFiles/openpose_caffe.dir/depend
cd /opt/openpose/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /opt/openpose /opt/openpose /opt/openpose/build /opt/openpose/build /opt/openpose/build/CMakeFiles/doc_doxygen.dir/DependInfo.cmake --color=
make -f CMakeFiles/doc_doxygen.dir/build.make CMakeFiles/doc_doxygen.dir/build
cd /opt/openpose/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /opt/openpose /opt/openpose /opt/openpose/build /opt/openpose/build /opt/openpose/build/CMakeFiles/openpose_caffe.dir/DependInfo.cmake --color=
make -f CMakeFiles/openpose_caffe.dir/build.make CMakeFiles/openpose_caffe.dir/build
/usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=1 "Generating API documentation with Doxygen"
cd /opt/openpose/doc && /usr/bin/doxygen /opt/openpose/doc/doc_autogeneration.doxygen
/usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=4 "Creating directories for 'openpose_caffe'"
/usr/bin/cmake -E make_directory /opt/openpose/3rdparty/caffe
/usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src/openpose_caffe-build
/usr/bin/cmake -E make_directory /opt/openpose/build/caffe
/usr/bin/cmake -E make_directory /opt/openpose/build/caffe/tmp
/usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src/openpose_caffe-stamp
/usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src
/usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-mkdir
/usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=5 "No download step for 'openpose_caffe'"
/usr/bin/cmake -E echo_append
/usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-download
/usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=7 "No patch step for 'openpose_caffe'"
/usr/bin/cmake -E echo_append
/usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-patch
/usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=6 "No update step for 'openpose_caffe'"
/usr/bin/cmake -E echo_append
/usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-update
/usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=8 "Performing configure step for 'openpose_caffe'"
cd /opt/openpose/build/caffe/src/openpose_caffe-build && /usr/bin/cmake -DCMAKE_INSTALL_PREFIX:PATH=/opt/openpose/build/caffe -DUSE_CUDNN=ON -DCUDA_ARCH_NAME=Auto -DCPU_ONLY=OFF -DCMAKE_BUILD_TYPE=Release -DBUILD_docs=OFF -DBUILD_python=OFF -DBUILD_python_layer=OFF -DUSE_LEVELDB=OFF -DUSE_LMDB=OFF -DUSE_OPENCV=OFF "-GUnix Makefiles" /opt/openpose/3rdparty/caffe
cd /opt/openpose/build/caffe/src/openpose_caffe-build && /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-configure
/usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=9 "Performing build step for 'openpose_caffe'"
cd /opt/openpose/build/caffe/src/openpose_caffe-build && make
/usr/bin/cmake -E cmake_echo_color --switch= --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=1 "Built target doc_doxygen"
make[3]: *** No targets specified and no makefile found. Stop.
CMakeFiles/openpose_caffe.dir/build.make:110: recipe for target 'caffe/src/openpose_caffe-stamp/openpose_caffe-build' failed
make[2]: *** [caffe/src/openpose_caffe-stamp/openpose_caffe-build] Error 2
CMakeFiles/Makefile2:104: recipe for target 'CMakeFiles/openpose_caffe.dir/all' failed
make[1]: *** [CMakeFiles/openpose_caffe.dir/all] Error 2
Makefile:83: recipe for target 'all' failed
make: *** [all] Error 2
The command '/bin/sh -c printenv && cd opt/openpose/build && make all -n -j"$(nproc)"' returned a non-zero code: 2


Two weird things also happen here. 1) If I run the image built so far with docker run -it openpose_image and then cd opt/openpose/build && make all -j"$(nproc)" I get the same exact error. 2) If I do instead nvidia-docker run -it openpose_image and then cd opt/openpose/build && make all -j"$(nproc)" the building runs smoothly, ending successfully without raising errors. Can somebody help me to figure out what is going on? Thanks










share|improve this question































    1















    I wrote the following Dockerfile to build an image with OpenPose (https://github.com/CMU-Perceptual-Computing-Lab/openpose)



    # Download base image
    FROM nvidia/cuda:9.0-cudnn7-devel

    # Set keyboard configuration in advance of installing CUDA
    #RUN apt-get update && apt-get install -yq keyboard-configuration

    #==========Caffe dependencies=================
    RUN apt-get --assume-yes update &&
    apt-get --assume-yes install build-essential
    libatlas-base-dev
    libprotobuf-dev
    libleveldb-dev
    libsnappy-dev
    libhdf5-serial-dev
    protobuf-compiler

    RUN apt-get --assume-yes install --no-install-recommends libboost-all-dev

    # Remaining dependencies
    RUN apt-get --assume-yes install libgflags-dev
    libgoogle-glog-dev
    liblmdb-dev

    #=========OpenCV============
    RUN apt-get update && apt-get --assume-yes install libopencv-dev
    python-opencv
    python-pip
    python-dev
    cmake
    libeigen3-dev
    doxygen

    #=========Python Libs=======
    RUN pip install --upgrade numpy
    protobuf
    opencv-python

    #=========OpenPose==========
    RUN apt-get -y install git
    RUN git clone --depth 10 https://github.com/CMU-Perceptual-Computing-Lab/openpose.git /opt/openpose
    RUN apt-get install -y cmake

    # Set environment variables
    ENV PATH "/usr/local/cuda-9.0/bin:$PATH"
    ENV LD_LIBRARY_PATH "/usr/local/cuda-9.0/lib64:$LD_LIBRARY_PATH"
    ENV OPENPOSE_ROOT /opt/openpose

    RUN cd /opt/openpose &&
    mkdir -p build && cd build &&
    cmake
    -DCMAKE_BUILD_TYPE="Release"
    -DBUILD_EXAMPLES=ON
    -DBUILD_DOCS=ON
    -DBUILD_SHARED_LIBS=ON
    -DDOWNLOAD_BODY_25_MODEL=ON
    -DDOWNLOAD_BODY_COCO_MODEL=ON
    -DDOWNLOAD_BODY_MPI_MODEL=ON
    -DDOWNLOAD_HAND_MODEL=ON
    -DWITH_3D_RENDERER:BOOL=OFF
    -DBUILD_PYTHON=ON ../

    RUN printenv && cd opt/openpose/build && make all -n -j"$(nproc)"


    When building the Dockerfile with nvidia-docker build -t openpose_image . I get the following error in the last step:



    Step 14/14 : RUN printenv && cd opt/openpose/build && make all -n -j"$(nproc)"
    ---> Running in 8cbc7a731e6d
    LIBRARY_PATH=/usr/local/cuda/lib64/stubs
    HOSTNAME=8cbc7a731e6d
    LD_LIBRARY_PATH=/usr/local/cuda-9.0/lib64:/usr/local/nvidia/lib:/usr/local/nvidia/lib64
    HOME=/root
    CUDA_VERSION=9.0.176
    NVIDIA_REQUIRE_CUDA=cuda>=9.0
    NVIDIA_DRIVER_CAPABILITIES=compute,utility
    PATH=/usr/local/cuda-9.0/bin:/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
    CUDA_PKG_VERSION=9-0=9.0.176-1
    CUDNN_VERSION=7.4.1.5
    PWD=/
    NVIDIA_VISIBLE_DEVICES=all
    NCCL_VERSION=2.3.7
    OPENPOSE_ROOT=/opt/openpose
    /usr/bin/cmake -H/opt/openpose -B/opt/openpose/build --check-build-system CMakeFiles/Makefile.cmake 0
    /usr/bin/cmake -E cmake_progress_start /opt/openpose/build/CMakeFiles /opt/openpose/build/CMakeFiles/progress.marks
    make -f CMakeFiles/Makefile2 all
    make -f CMakeFiles/doc_doxygen.dir/build.make CMakeFiles/doc_doxygen.dir/depend
    make -f CMakeFiles/openpose_caffe.dir/build.make CMakeFiles/openpose_caffe.dir/depend
    cd /opt/openpose/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /opt/openpose /opt/openpose /opt/openpose/build /opt/openpose/build /opt/openpose/build/CMakeFiles/doc_doxygen.dir/DependInfo.cmake --color=
    make -f CMakeFiles/doc_doxygen.dir/build.make CMakeFiles/doc_doxygen.dir/build
    cd /opt/openpose/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /opt/openpose /opt/openpose /opt/openpose/build /opt/openpose/build /opt/openpose/build/CMakeFiles/openpose_caffe.dir/DependInfo.cmake --color=
    make -f CMakeFiles/openpose_caffe.dir/build.make CMakeFiles/openpose_caffe.dir/build
    /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=1 "Generating API documentation with Doxygen"
    cd /opt/openpose/doc && /usr/bin/doxygen /opt/openpose/doc/doc_autogeneration.doxygen
    /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=4 "Creating directories for 'openpose_caffe'"
    /usr/bin/cmake -E make_directory /opt/openpose/3rdparty/caffe
    /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src/openpose_caffe-build
    /usr/bin/cmake -E make_directory /opt/openpose/build/caffe
    /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/tmp
    /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src/openpose_caffe-stamp
    /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src
    /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-mkdir
    /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=5 "No download step for 'openpose_caffe'"
    /usr/bin/cmake -E echo_append
    /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-download
    /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=7 "No patch step for 'openpose_caffe'"
    /usr/bin/cmake -E echo_append
    /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-patch
    /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=6 "No update step for 'openpose_caffe'"
    /usr/bin/cmake -E echo_append
    /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-update
    /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=8 "Performing configure step for 'openpose_caffe'"
    cd /opt/openpose/build/caffe/src/openpose_caffe-build && /usr/bin/cmake -DCMAKE_INSTALL_PREFIX:PATH=/opt/openpose/build/caffe -DUSE_CUDNN=ON -DCUDA_ARCH_NAME=Auto -DCPU_ONLY=OFF -DCMAKE_BUILD_TYPE=Release -DBUILD_docs=OFF -DBUILD_python=OFF -DBUILD_python_layer=OFF -DUSE_LEVELDB=OFF -DUSE_LMDB=OFF -DUSE_OPENCV=OFF "-GUnix Makefiles" /opt/openpose/3rdparty/caffe
    cd /opt/openpose/build/caffe/src/openpose_caffe-build && /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-configure
    /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=9 "Performing build step for 'openpose_caffe'"
    cd /opt/openpose/build/caffe/src/openpose_caffe-build && make
    /usr/bin/cmake -E cmake_echo_color --switch= --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=1 "Built target doc_doxygen"
    make[3]: *** No targets specified and no makefile found. Stop.
    CMakeFiles/openpose_caffe.dir/build.make:110: recipe for target 'caffe/src/openpose_caffe-stamp/openpose_caffe-build' failed
    make[2]: *** [caffe/src/openpose_caffe-stamp/openpose_caffe-build] Error 2
    CMakeFiles/Makefile2:104: recipe for target 'CMakeFiles/openpose_caffe.dir/all' failed
    make[1]: *** [CMakeFiles/openpose_caffe.dir/all] Error 2
    Makefile:83: recipe for target 'all' failed
    make: *** [all] Error 2
    The command '/bin/sh -c printenv && cd opt/openpose/build && make all -n -j"$(nproc)"' returned a non-zero code: 2


    Two weird things also happen here. 1) If I run the image built so far with docker run -it openpose_image and then cd opt/openpose/build && make all -j"$(nproc)" I get the same exact error. 2) If I do instead nvidia-docker run -it openpose_image and then cd opt/openpose/build && make all -j"$(nproc)" the building runs smoothly, ending successfully without raising errors. Can somebody help me to figure out what is going on? Thanks










    share|improve this question



























      1












      1








      1








      I wrote the following Dockerfile to build an image with OpenPose (https://github.com/CMU-Perceptual-Computing-Lab/openpose)



      # Download base image
      FROM nvidia/cuda:9.0-cudnn7-devel

      # Set keyboard configuration in advance of installing CUDA
      #RUN apt-get update && apt-get install -yq keyboard-configuration

      #==========Caffe dependencies=================
      RUN apt-get --assume-yes update &&
      apt-get --assume-yes install build-essential
      libatlas-base-dev
      libprotobuf-dev
      libleveldb-dev
      libsnappy-dev
      libhdf5-serial-dev
      protobuf-compiler

      RUN apt-get --assume-yes install --no-install-recommends libboost-all-dev

      # Remaining dependencies
      RUN apt-get --assume-yes install libgflags-dev
      libgoogle-glog-dev
      liblmdb-dev

      #=========OpenCV============
      RUN apt-get update && apt-get --assume-yes install libopencv-dev
      python-opencv
      python-pip
      python-dev
      cmake
      libeigen3-dev
      doxygen

      #=========Python Libs=======
      RUN pip install --upgrade numpy
      protobuf
      opencv-python

      #=========OpenPose==========
      RUN apt-get -y install git
      RUN git clone --depth 10 https://github.com/CMU-Perceptual-Computing-Lab/openpose.git /opt/openpose
      RUN apt-get install -y cmake

      # Set environment variables
      ENV PATH "/usr/local/cuda-9.0/bin:$PATH"
      ENV LD_LIBRARY_PATH "/usr/local/cuda-9.0/lib64:$LD_LIBRARY_PATH"
      ENV OPENPOSE_ROOT /opt/openpose

      RUN cd /opt/openpose &&
      mkdir -p build && cd build &&
      cmake
      -DCMAKE_BUILD_TYPE="Release"
      -DBUILD_EXAMPLES=ON
      -DBUILD_DOCS=ON
      -DBUILD_SHARED_LIBS=ON
      -DDOWNLOAD_BODY_25_MODEL=ON
      -DDOWNLOAD_BODY_COCO_MODEL=ON
      -DDOWNLOAD_BODY_MPI_MODEL=ON
      -DDOWNLOAD_HAND_MODEL=ON
      -DWITH_3D_RENDERER:BOOL=OFF
      -DBUILD_PYTHON=ON ../

      RUN printenv && cd opt/openpose/build && make all -n -j"$(nproc)"


      When building the Dockerfile with nvidia-docker build -t openpose_image . I get the following error in the last step:



      Step 14/14 : RUN printenv && cd opt/openpose/build && make all -n -j"$(nproc)"
      ---> Running in 8cbc7a731e6d
      LIBRARY_PATH=/usr/local/cuda/lib64/stubs
      HOSTNAME=8cbc7a731e6d
      LD_LIBRARY_PATH=/usr/local/cuda-9.0/lib64:/usr/local/nvidia/lib:/usr/local/nvidia/lib64
      HOME=/root
      CUDA_VERSION=9.0.176
      NVIDIA_REQUIRE_CUDA=cuda>=9.0
      NVIDIA_DRIVER_CAPABILITIES=compute,utility
      PATH=/usr/local/cuda-9.0/bin:/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
      CUDA_PKG_VERSION=9-0=9.0.176-1
      CUDNN_VERSION=7.4.1.5
      PWD=/
      NVIDIA_VISIBLE_DEVICES=all
      NCCL_VERSION=2.3.7
      OPENPOSE_ROOT=/opt/openpose
      /usr/bin/cmake -H/opt/openpose -B/opt/openpose/build --check-build-system CMakeFiles/Makefile.cmake 0
      /usr/bin/cmake -E cmake_progress_start /opt/openpose/build/CMakeFiles /opt/openpose/build/CMakeFiles/progress.marks
      make -f CMakeFiles/Makefile2 all
      make -f CMakeFiles/doc_doxygen.dir/build.make CMakeFiles/doc_doxygen.dir/depend
      make -f CMakeFiles/openpose_caffe.dir/build.make CMakeFiles/openpose_caffe.dir/depend
      cd /opt/openpose/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /opt/openpose /opt/openpose /opt/openpose/build /opt/openpose/build /opt/openpose/build/CMakeFiles/doc_doxygen.dir/DependInfo.cmake --color=
      make -f CMakeFiles/doc_doxygen.dir/build.make CMakeFiles/doc_doxygen.dir/build
      cd /opt/openpose/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /opt/openpose /opt/openpose /opt/openpose/build /opt/openpose/build /opt/openpose/build/CMakeFiles/openpose_caffe.dir/DependInfo.cmake --color=
      make -f CMakeFiles/openpose_caffe.dir/build.make CMakeFiles/openpose_caffe.dir/build
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=1 "Generating API documentation with Doxygen"
      cd /opt/openpose/doc && /usr/bin/doxygen /opt/openpose/doc/doc_autogeneration.doxygen
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=4 "Creating directories for 'openpose_caffe'"
      /usr/bin/cmake -E make_directory /opt/openpose/3rdparty/caffe
      /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src/openpose_caffe-build
      /usr/bin/cmake -E make_directory /opt/openpose/build/caffe
      /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/tmp
      /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src/openpose_caffe-stamp
      /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src
      /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-mkdir
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=5 "No download step for 'openpose_caffe'"
      /usr/bin/cmake -E echo_append
      /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-download
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=7 "No patch step for 'openpose_caffe'"
      /usr/bin/cmake -E echo_append
      /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-patch
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=6 "No update step for 'openpose_caffe'"
      /usr/bin/cmake -E echo_append
      /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-update
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=8 "Performing configure step for 'openpose_caffe'"
      cd /opt/openpose/build/caffe/src/openpose_caffe-build && /usr/bin/cmake -DCMAKE_INSTALL_PREFIX:PATH=/opt/openpose/build/caffe -DUSE_CUDNN=ON -DCUDA_ARCH_NAME=Auto -DCPU_ONLY=OFF -DCMAKE_BUILD_TYPE=Release -DBUILD_docs=OFF -DBUILD_python=OFF -DBUILD_python_layer=OFF -DUSE_LEVELDB=OFF -DUSE_LMDB=OFF -DUSE_OPENCV=OFF "-GUnix Makefiles" /opt/openpose/3rdparty/caffe
      cd /opt/openpose/build/caffe/src/openpose_caffe-build && /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-configure
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=9 "Performing build step for 'openpose_caffe'"
      cd /opt/openpose/build/caffe/src/openpose_caffe-build && make
      /usr/bin/cmake -E cmake_echo_color --switch= --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=1 "Built target doc_doxygen"
      make[3]: *** No targets specified and no makefile found. Stop.
      CMakeFiles/openpose_caffe.dir/build.make:110: recipe for target 'caffe/src/openpose_caffe-stamp/openpose_caffe-build' failed
      make[2]: *** [caffe/src/openpose_caffe-stamp/openpose_caffe-build] Error 2
      CMakeFiles/Makefile2:104: recipe for target 'CMakeFiles/openpose_caffe.dir/all' failed
      make[1]: *** [CMakeFiles/openpose_caffe.dir/all] Error 2
      Makefile:83: recipe for target 'all' failed
      make: *** [all] Error 2
      The command '/bin/sh -c printenv && cd opt/openpose/build && make all -n -j"$(nproc)"' returned a non-zero code: 2


      Two weird things also happen here. 1) If I run the image built so far with docker run -it openpose_image and then cd opt/openpose/build && make all -j"$(nproc)" I get the same exact error. 2) If I do instead nvidia-docker run -it openpose_image and then cd opt/openpose/build && make all -j"$(nproc)" the building runs smoothly, ending successfully without raising errors. Can somebody help me to figure out what is going on? Thanks










      share|improve this question
















      I wrote the following Dockerfile to build an image with OpenPose (https://github.com/CMU-Perceptual-Computing-Lab/openpose)



      # Download base image
      FROM nvidia/cuda:9.0-cudnn7-devel

      # Set keyboard configuration in advance of installing CUDA
      #RUN apt-get update && apt-get install -yq keyboard-configuration

      #==========Caffe dependencies=================
      RUN apt-get --assume-yes update &&
      apt-get --assume-yes install build-essential
      libatlas-base-dev
      libprotobuf-dev
      libleveldb-dev
      libsnappy-dev
      libhdf5-serial-dev
      protobuf-compiler

      RUN apt-get --assume-yes install --no-install-recommends libboost-all-dev

      # Remaining dependencies
      RUN apt-get --assume-yes install libgflags-dev
      libgoogle-glog-dev
      liblmdb-dev

      #=========OpenCV============
      RUN apt-get update && apt-get --assume-yes install libopencv-dev
      python-opencv
      python-pip
      python-dev
      cmake
      libeigen3-dev
      doxygen

      #=========Python Libs=======
      RUN pip install --upgrade numpy
      protobuf
      opencv-python

      #=========OpenPose==========
      RUN apt-get -y install git
      RUN git clone --depth 10 https://github.com/CMU-Perceptual-Computing-Lab/openpose.git /opt/openpose
      RUN apt-get install -y cmake

      # Set environment variables
      ENV PATH "/usr/local/cuda-9.0/bin:$PATH"
      ENV LD_LIBRARY_PATH "/usr/local/cuda-9.0/lib64:$LD_LIBRARY_PATH"
      ENV OPENPOSE_ROOT /opt/openpose

      RUN cd /opt/openpose &&
      mkdir -p build && cd build &&
      cmake
      -DCMAKE_BUILD_TYPE="Release"
      -DBUILD_EXAMPLES=ON
      -DBUILD_DOCS=ON
      -DBUILD_SHARED_LIBS=ON
      -DDOWNLOAD_BODY_25_MODEL=ON
      -DDOWNLOAD_BODY_COCO_MODEL=ON
      -DDOWNLOAD_BODY_MPI_MODEL=ON
      -DDOWNLOAD_HAND_MODEL=ON
      -DWITH_3D_RENDERER:BOOL=OFF
      -DBUILD_PYTHON=ON ../

      RUN printenv && cd opt/openpose/build && make all -n -j"$(nproc)"


      When building the Dockerfile with nvidia-docker build -t openpose_image . I get the following error in the last step:



      Step 14/14 : RUN printenv && cd opt/openpose/build && make all -n -j"$(nproc)"
      ---> Running in 8cbc7a731e6d
      LIBRARY_PATH=/usr/local/cuda/lib64/stubs
      HOSTNAME=8cbc7a731e6d
      LD_LIBRARY_PATH=/usr/local/cuda-9.0/lib64:/usr/local/nvidia/lib:/usr/local/nvidia/lib64
      HOME=/root
      CUDA_VERSION=9.0.176
      NVIDIA_REQUIRE_CUDA=cuda>=9.0
      NVIDIA_DRIVER_CAPABILITIES=compute,utility
      PATH=/usr/local/cuda-9.0/bin:/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
      CUDA_PKG_VERSION=9-0=9.0.176-1
      CUDNN_VERSION=7.4.1.5
      PWD=/
      NVIDIA_VISIBLE_DEVICES=all
      NCCL_VERSION=2.3.7
      OPENPOSE_ROOT=/opt/openpose
      /usr/bin/cmake -H/opt/openpose -B/opt/openpose/build --check-build-system CMakeFiles/Makefile.cmake 0
      /usr/bin/cmake -E cmake_progress_start /opt/openpose/build/CMakeFiles /opt/openpose/build/CMakeFiles/progress.marks
      make -f CMakeFiles/Makefile2 all
      make -f CMakeFiles/doc_doxygen.dir/build.make CMakeFiles/doc_doxygen.dir/depend
      make -f CMakeFiles/openpose_caffe.dir/build.make CMakeFiles/openpose_caffe.dir/depend
      cd /opt/openpose/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /opt/openpose /opt/openpose /opt/openpose/build /opt/openpose/build /opt/openpose/build/CMakeFiles/doc_doxygen.dir/DependInfo.cmake --color=
      make -f CMakeFiles/doc_doxygen.dir/build.make CMakeFiles/doc_doxygen.dir/build
      cd /opt/openpose/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /opt/openpose /opt/openpose /opt/openpose/build /opt/openpose/build /opt/openpose/build/CMakeFiles/openpose_caffe.dir/DependInfo.cmake --color=
      make -f CMakeFiles/openpose_caffe.dir/build.make CMakeFiles/openpose_caffe.dir/build
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=1 "Generating API documentation with Doxygen"
      cd /opt/openpose/doc && /usr/bin/doxygen /opt/openpose/doc/doc_autogeneration.doxygen
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=4 "Creating directories for 'openpose_caffe'"
      /usr/bin/cmake -E make_directory /opt/openpose/3rdparty/caffe
      /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src/openpose_caffe-build
      /usr/bin/cmake -E make_directory /opt/openpose/build/caffe
      /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/tmp
      /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src/openpose_caffe-stamp
      /usr/bin/cmake -E make_directory /opt/openpose/build/caffe/src
      /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-mkdir
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=5 "No download step for 'openpose_caffe'"
      /usr/bin/cmake -E echo_append
      /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-download
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=7 "No patch step for 'openpose_caffe'"
      /usr/bin/cmake -E echo_append
      /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-patch
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=6 "No update step for 'openpose_caffe'"
      /usr/bin/cmake -E echo_append
      /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-update
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=8 "Performing configure step for 'openpose_caffe'"
      cd /opt/openpose/build/caffe/src/openpose_caffe-build && /usr/bin/cmake -DCMAKE_INSTALL_PREFIX:PATH=/opt/openpose/build/caffe -DUSE_CUDNN=ON -DCUDA_ARCH_NAME=Auto -DCPU_ONLY=OFF -DCMAKE_BUILD_TYPE=Release -DBUILD_docs=OFF -DBUILD_python=OFF -DBUILD_python_layer=OFF -DUSE_LEVELDB=OFF -DUSE_LMDB=OFF -DUSE_OPENCV=OFF "-GUnix Makefiles" /opt/openpose/3rdparty/caffe
      cd /opt/openpose/build/caffe/src/openpose_caffe-build && /usr/bin/cmake -E touch /opt/openpose/build/caffe/src/openpose_caffe-stamp/openpose_caffe-configure
      /usr/bin/cmake -E cmake_echo_color --switch= --blue --bold --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=9 "Performing build step for 'openpose_caffe'"
      cd /opt/openpose/build/caffe/src/openpose_caffe-build && make
      /usr/bin/cmake -E cmake_echo_color --switch= --progress-dir=/opt/openpose/build/CMakeFiles --progress-num=1 "Built target doc_doxygen"
      make[3]: *** No targets specified and no makefile found. Stop.
      CMakeFiles/openpose_caffe.dir/build.make:110: recipe for target 'caffe/src/openpose_caffe-stamp/openpose_caffe-build' failed
      make[2]: *** [caffe/src/openpose_caffe-stamp/openpose_caffe-build] Error 2
      CMakeFiles/Makefile2:104: recipe for target 'CMakeFiles/openpose_caffe.dir/all' failed
      make[1]: *** [CMakeFiles/openpose_caffe.dir/all] Error 2
      Makefile:83: recipe for target 'all' failed
      make: *** [all] Error 2
      The command '/bin/sh -c printenv && cd opt/openpose/build && make all -n -j"$(nproc)"' returned a non-zero code: 2


      Two weird things also happen here. 1) If I run the image built so far with docker run -it openpose_image and then cd opt/openpose/build && make all -j"$(nproc)" I get the same exact error. 2) If I do instead nvidia-docker run -it openpose_image and then cd opt/openpose/build && make all -j"$(nproc)" the building runs smoothly, ending successfully without raising errors. Can somebody help me to figure out what is going on? Thanks







      docker dockerfile nvidia-docker openpose






      share|improve this question















      share|improve this question













      share|improve this question




      share|improve this question








      edited Nov 23 '18 at 14:38









      talonmies

      59.8k17132199




      59.8k17132199










      asked Nov 23 '18 at 14:36









      Gianluca John MassimianiGianluca John Massimiani

      1017




      1017
























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