How to change the path so that screen can take the default python path?
I am using a python script from GitHub to do some of my analysis. To run the script, I required some other programs which are also installed in our server. I linked the software with those programs by the following command.
ln -s /usr/local/bin/clustalo
ln -s /usr/bin/blastn
The script behaves properly when I run it in our server and taking the python from the following path.
/usr/bin/python
But I can't run the program on screen because the python path is now as following and all the dependencies are not in this path.
userdata/student_users/X/software/miniconda2/bin/python
How can I change the path of the screen so that it takes this path?
/usr/bin/python
python path screen
asked Nov 21 '18 at 4:57
user266095user266095
54
add a comment |
I am using a python script from GitHub to do some of my analysis. To run the script, I required some other programs which are also installed in our server. I linked the software with those programs by the following command.
ln -s /usr/local/bin/clustalo
ln -s /usr/bin/blastn
The script behaves properly when I run it in our server and taking the python from the following path.
/usr/bin/python
But I can't run the program on screen because the python path is now as following and all the dependencies are not in this path.
userdata/student_users/X/software/miniconda2/bin/python
How can I change the path of the screen so that it takes this path?
/usr/bin/python
python path screen
asked Nov 21 '18 at 4:57
user266095user266095
54
what's the path to the dependencies on the server?
– richflow
Nov 21 '18 at 5:07
also, you may want to edit your post to protect your privacy. the world can see your student username, what university you go to and what department you belong to.
– richflow
Nov 21 '18 at 5:08
Hi, Thanks. I edit those. It use /usr/bin or /usr/local/bin
– user266095
Nov 21 '18 at 6:30
add a comment |
I am using a python script from GitHub to do some of my analysis. To run the script, I required some other programs which are also installed in our server. I linked the software with those programs by the following command.
ln -s /usr/local/bin/clustalo
ln -s /usr/bin/blastn
The script behaves properly when I run it in our server and taking the python from the following path.
/usr/bin/python
But I can't run the program on screen because the python path is now as following and all the dependencies are not in this path.
userdata/student_users/X/software/miniconda2/bin/python
How can I change the path of the screen so that it takes this path?
/usr/bin/python
python path screen
asked Nov 21 '18 at 4:57
user266095user266095
54
I am using a python script from GitHub to do some of my analysis. To run the script, I required some other programs which are also installed in our server. I linked the software with those programs by the following command.
ln -s /usr/local/bin/clustalo
ln -s /usr/bin/blastn
The script behaves properly when I run it in our server and taking the python from the following path.
/usr/bin/python
But I can't run the program on screen because the python path is now as following and all the dependencies are not in this path.
userdata/student_users/X/software/miniconda2/bin/python
How can I change the path of the screen so that it takes this path?
/usr/bin/python
python path screen
python path screen
asked Nov 21 '18 at 4:57
user266095user266095
54
asked Nov 21 '18 at 4:57
user266095user266095
54
edited Nov 21 '18 at 6:28
user266095
asked Nov 21 '18 at 4:57
user266095user266095
54
asked Nov 21 '18 at 4:57
user266095user266095
54
asked Nov 21 '18 at 4:57
user266095user266095
54
54
what's the path to the dependencies on the server?
– richflow
Nov 21 '18 at 5:07
also, you may want to edit your post to protect your privacy. the world can see your student username, what university you go to and what department you belong to.
– richflow
Nov 21 '18 at 5:08
Hi, Thanks. I edit those. It use /usr/bin or /usr/local/bin
– user266095
Nov 21 '18 at 6:30
add a comment |
what's the path to the dependencies on the server?
– richflow
Nov 21 '18 at 5:07
also, you may want to edit your post to protect your privacy. the world can see your student username, what university you go to and what department you belong to.
– richflow
Nov 21 '18 at 5:08
Hi, Thanks. I edit those. It use /usr/bin or /usr/local/bin
– user266095
Nov 21 '18 at 6:30
what's the path to the dependencies on the server?
– richflow
Nov 21 '18 at 5:07
what's the path to the dependencies on the server?
– richflow
Nov 21 '18 at 5:07
also, you may want to edit your post to protect your privacy. the world can see your student username, what university you go to and what department you belong to.
– richflow
Nov 21 '18 at 5:08
also, you may want to edit your post to protect your privacy. the world can see your student username, what university you go to and what department you belong to.
– richflow
Nov 21 '18 at 5:08
Hi, Thanks. I edit those. It use /usr/bin or /usr/local/bin
– user266095
Nov 21 '18 at 6:30
Hi, Thanks. I edit those. It use /usr/bin or /usr/local/bin
– user266095
Nov 21 '18 at 6:30
add a comment |
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what's the path to the dependencies on the server?
– richflow
Nov 21 '18 at 5:07
also, you may want to edit your post to protect your privacy. the world can see your student username, what university you go to and what department you belong to.
– richflow
Nov 21 '18 at 5:08
Hi, Thanks. I edit those. It use /usr/bin or /usr/local/bin
– user266095
Nov 21 '18 at 6:30